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Transcript Report

Transcript ID AFUA_5G02330
Transcript Details
Genomic Location View transcript in genomic location: 605138 - 605720 bp (605.1 Kb) on chromosome fragment 53
This transcript is located in sequence: 53.7
Description Afu5g02330 (Alt. Locus), major allergen and cytotoxin AspF1, mitogillin F, identical to major allergen I (GI:166486) (Aspergillus fumigatus) PMID: 1431110, 2230656, 8195680, 10482390 similar to c-sarcin precursor; clavin; c-sar (GI:1825463) (Aspergillus clavatus) PMID: 9080594, 7778122, 12785313, 8706730 similar to gigantin (GI:2073388) (Aspergillus giganteus) PMID: 9224729 similar to Ribonuclease mitogillin precursor (Restrictocin) (GI:54039255) (Aspergillus restrictus) PMID: 2020539, 1943712, 8805570, 11685244, 11811644, (3.1.27.-) [Link to Allergen Table]  
Prediction Method First-pass computational and manual annotation were carried out via TIGR and the Wellcome Trust Sanger Institute as part of an international project in 2005. Several programs were also used by the Sanger Institute and TIGR to aid in the functional assignment of a predicted gene: i.e., NAP, BLASTP, InterProScan, HMM2, PrositeSearch, Psort, SignalP and TMHMM. Second-pass computational and manual annotation were carried out via the JCVI as part of an international comparative project in 2007. 
Similarity Matches This Ensembl entry corresponds to the following database identifiers:
GO GO:0009405
Export Data Export transcript data in EMBL, GenBank or FASTA

 Date : 2010-09-05 19:04:27 Help Desk / Suggestions