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Gene Report

Gene ID AFUA_5G02360
Genomic Location View gene in genomic location: 595506 - 598051 bp (595.5 Kb) on supercontig 53
This gene is located in sequence: 53.6
Description Afu5g02360 (Alt. Locus), vacuolar dynamin-like GTPase VpsA, putative, similr to VpsA (GI:17148576) (Emericella nidulans) PMID: 11368897 similr to SP:P21576: Vacuolar sorting protein 1, GTP-binding protein VPS1 (Saccharomyces cerevisiae) PMID: 8299420, (3.6.5.5)  
Prediction Method First-pass computational and manual annotation were carried out via TIGR and the Wellcome Trust Sanger Institute as part of an international project in 2005. Several programs were also used by the Sanger Institute and TIGR to aid in the functional assignment of a predicted gene: i.e., NAP, BLASTP, InterProScan, HMM2, PrositeSearch, Psort, SignalP and TMHMM. Second-pass computational and manual annotation were carried out via the JCVI as part of an international comparative project in 2007. 
Prediction Transcript
Transcript Neighbourhood



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Transcript/Translation Summary

AFUA_5G02360
GO GO:0045053
GO:0003924
GO:0005624
GO:0006623
GO:0007031
GO:0007034
Transcript Structure

Protein Features



 Date : 2010-09-05 19:39:50 Help Desk / Suggestions